Why these cookies are IBS-friendly
Standard chocolate chip cookies hide three classic IBS triggers: wheat flour (fructans), milk chocolate (lactose), and honey-sweetened brands. This recipe swaps in a gluten-free flour blend, 70% dark chocolate (Low FODMAP up to 30 g per serve), and lactose-free butter so each cookie stays inside Monash University's tested thresholds.
Looking for more sweet ideas? Browse our Low FODMAP Desserts Hub for 15+ tested treats.
Step-by-step instructions
- Preheat the oven to 175 °C (350 °F). Line 2 baking sheets with parchment paper.
- Whisk dry ingredients — flour, baking soda, and salt — in a bowl. Set aside.
- Cream butter + sugars with an electric mixer for 2 minutes, until light and fluffy.
- Beat in egg, yolk, and vanilla for 1 minute until glossy.
- Add the dry mix in 2 additions on low speed. Stop as soon as no flour streaks remain.
- Fold in chocolate chips (and nuts, if using).
- Scoop 2-tbsp portions (≈40 g each) onto the trays, 5 cm apart. Makes 18 cookies.
- Bake 10–12 minutes — pull when edges are set but centres still look slightly underdone.
- Cool on the tray 5 minutes, then transfer to a wire rack. They firm up as they cool.
Serving size & FODMAP safety
1 serve = 1 cookie (≈40 g). Stay inside these tested portions:
| Ingredient | Low FODMAP serve | Per cookie (÷18) |
|---|---|---|
| Gluten-free flour | unrestricted | ≈12 g |
| Dark chocolate (70%) | 30 g | ≈10 g |
| Butter | unlimited (no FODMAPs) | ≈9 g |
| Brown sugar | 1 tbsp per serve | ≈9 g |
| Walnuts | 30 g | ≈2 g |
Two cookies in one sitting are still within range, but doubling up with milk, fruit, or other dessert items can stack FODMAPs — see why in our FODMAP Stacking Guide. Unsure about a swap? Check it with the Low FODMAP Food Checker.
High → Low FODMAP swaps
| Skip (High FODMAP) | Use instead (Low FODMAP) |
|---|---|
| Wheat flour | Gluten-free plain flour blend |
| Milk chocolate chips | 70% dark chocolate chips (≤30 g/serve) |
| Honey | Maple syrup (rarely needed here) |
| Buttermilk | Lactose-free milk + lemon juice |
| Cashews / pistachios | Walnuts or pecans |
| Sweetened condensed milk | Skip — too high in lactose |
| Coconut flour | GF flour blend (high oligos in coconut flour) |
Variations (still Low FODMAP)
- Double chocolate: swap 2 tbsp flour for cocoa powder.
- Sea-salt finish: sprinkle flaky salt on top right after baking.
- Brown-butter version: brown the butter first, cool, then proceed.
- Dairy-free: use vegan/lactose-free butter and dairy-free dark chocolate chips.
Storage & freezing
- Room temperature: airtight container, 4 days.
- Refrigerate dough balls: up to 3 days, then bake fresh.
- Freeze dough balls: 3 months. Bake from frozen, add 2 minutes.
Common mistakes to avoid
- Overbaking — centres should look soft when you pull them. They set on the tray.
- Skipping the extra yolk — it's what makes them chewy without gluten.
- Using milk chocolate — lactose pushes them over the threshold.
- Eating 4+ in one sitting — even Low FODMAP cookies stack sugar polyols when piled with other desserts.
- Using almond flour as the base — high in GOS at the quantity needed for cookies.
Sources & further reading
- Monash University FODMAP Diet App — https://www.monashfodmap.com/
- Monash blog: Chocolate and the Low FODMAP diet — https://www.monashfodmap.com/blog/chocolate-fodmap-diet/
Medical disclaimer: This recipe is for informational purposes only and is not a substitute for personalised advice from a FODMAP-trained dietitian.




